Transcript: ENST00000359758.5 SPAG11B-001

Description

sperm associated antigen 11B [Source:HGNC Symbol;Acc:14534]

Gene Synonyms

EDDM2A, EDDM2B, EP2, EP2C, EP2D, HE2, HE2C, SPAG11

Location

Chromosome 8: 7,305,275-7,321,048 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 7609 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSG00000164871.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398462.2	SPAG11B-007	655	133aa	ENSP00000381480.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47774	A8MZA0	NM_058201.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317900.5	SPAG11B-004	806	113aa	ENSP00000322591.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5967	Q08648	NM_058203.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297498.2	SPAG11B-003	795	103aa	ENSP00000297498.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5966	Q08648	NM_016512.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359758.5	SPAG11B-001	612	108aa	ENSP00000352797.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5964	E9PAK7	NM_058200.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361111.2	SPAG11B-002	534	82aa	ENSP00000354411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5965	-	NM_058202.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528168.1	SPAG11B-005	481	50aa	ENSP00000431230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q08648	NM_058206.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458665.1	SPAG11B-006	444	80aa	ENSP00000398550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q08648	NM_058207.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528943.1	SPAG11B-009	408	106aa	ENSP00000437154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YF39	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000528767.1	SPAG11B-008	552	53aa	ENSP00000432257.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 612 bps, Translation length: 108 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5964

Version

ENST00000359758.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251309 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000359758.5 SPAG11B-001

Summary