Transcript: ENST00000513607.2 SLC6A18-003

Description

solute carrier family 6 (neutral amino acid transporter), member 18 [Source:HGNC Symbol;Acc:26441]

Gene Synonyms

FLJ31236, XTRP2, Xtrp2

Location

About this transcript

This transcript has 3 exons, is associated with 4145 variant alleles and maps to 92 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324642.3	SLC6A18-001	2121	628aa	ENSP00000323549.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3860	Q96N87	NM_182632.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296821.4	SLC6A18-201	1317	397aa	ENSP00000296821.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EML8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513607.2	SLC6A18-003	459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 459 bps,

Version

ENST00000513607.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365556 (version 2)