Transcript: ENST00000506263.1 GFM2-006

Description

G elongation factor, mitochondrial 2 [Source:HGNC Symbol;Acc:29682]

Gene Synonyms

EF-G2mt, EFG2, FLJ21661, MRRF2, MST027, RRF2, RRF2mt, hEFG2, mEF-G 2

Location

Chromosome 5: 74,026,085-74,029,213 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1373 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSG00000164347.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296805.3	GFM2-001	3249	779aa	ENSP00000296805.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4023	D6RF75 Q969S9	NM_032380.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509430.1	GFM2-004	3047	779aa	ENSP00000427004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4023	D6RF75 Q969S9	NM_001281302.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345239.2	GFM2-002	2856	732aa	ENSP00000296804.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4024	D6RF75 Q969S9	NM_170691.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427854.2	GFM2-003	1870	513aa	ENSP00000405808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47232	D6RF75 Q969S9	NM_170681.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509097.1	GFM2-005	1004	285aa	ENSP00000421717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAL1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506778.1	GFM2-011	566	64aa	ENSP00000424877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF75	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515125.1	GFM2-008	1125	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514734.1	GFM2-007	907	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506263.1	GFM2-006	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513331.1	GFM2-010	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 506 bps,

Version

ENST00000506263.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371116 (version 1)

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Transcript: ENST00000506263.1 GFM2-006

Summary