Transcript: ENST00000504367.1 TLR3-003

Description

toll-like receptor 3 [Source:HGNC Symbol;Acc:11849]

Gene Synonyms

CD283, IIAE2

Location

Chromosome 4: 187,002,771-187,006,043 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 41 domains and features, is associated with 1944 variant alleles and maps to 285 oligo probes.

Gene

This transcript is a product of gene ENSG00000164342.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296795.3	TLR3-001	6015	904aa	ENSP00000296795.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3846	E6Y0F1 E9PGH4 O15455 Q1KMK2	NM_003265.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504367.1	TLR3-003	2310	627aa	ENSP00000423684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGH4 Q1KMK2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513189.1	TLR3-002	1156	351aa	ENSP00000423386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA51	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508051.1	TLR3-005	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512264.1	TLR3-004	2942	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,310 bps, Translation length: 627 residues

Version

ENST00000504367.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000360345 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000504367.1 TLR3-003

Summary