Transcript: ENST00000296694.4 SCGB3A2-001

Description

secretoglobin, family 3A, member 2 [Source:HGNC Symbol;Acc:18391]

Gene Synonyms

LU103, PNSP1, UGRP1, pnSP-1

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 1595 variant alleles and maps to 201 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296694.4	SCGB3A2-001	515	93aa	ENSP00000296694.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4287	D6RBX5 Q2L6B3 Q96PL1	NM_054023.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504320.1	SCGB3A2-002	440	48aa	ENSP00000423930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBX5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514688.1	SCGB3A2-003	672	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507160.1	SCGB3A2-004	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 515 bps, Translation length: 93 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PL1

CCDS

This transcript is a member of the Human CCDS set: CCDS4287

Version

ENST00000296694.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251939 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.