Transcript: ENST00000509443.1 NDUFS4-006

Description

NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7711]

Gene Synonyms

AQDQ, CI-18

Location

About this transcript

This transcript has 2 exons, is associated with 5258 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296684.5	NDUFS4-001	673	175aa	ENSP00000296684.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3960	O43181	NM_002495.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506765.1	NDUFS4-005	559	116aa	ENSP00000424570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9M8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506974.1	NDUFS4-004	833	131aa	ENSP00000425967.1	Nonsense mediated decay		D6RI09	-	-
ENST00000507026.1	NDUFS4-003	680	49aa	ENSP00000424993.1	Nonsense mediated decay		D6REP1	-	-
ENST00000502423.1	NDUFS4-002	562	73aa	ENSP00000422177.1	Nonsense mediated decay		D6R916	-	-
ENST00000509443.1	NDUFS4-006	450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 450 bps,

Version

ENST00000509443.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000368421 (version 1)