Transcript: ENST00000448461.1 ZNF589-005

Description

zinc finger protein 589 [Source:HGNC Symbol;Acc:16747]

Gene Synonyms

SZF1

Location

Chromosome 3: 48,282,619-48,329,117 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 28 domains and features, is associated with 18731 variant alleles and maps to 655 oligo probes.

Gene

This transcript is a product of gene ENSG00000164048.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354698.3	ZNF589-001	3368	364aa	ENSP00000346729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43085	Q59FS2 Q86UQ0	NM_016089.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427617.2	ZNF589-004	1677	96aa	ENSP00000392719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1J1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440261.2	ZNF589-002	917	177aa	ENSP00000408719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQF9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412564.1	ZNF589-003	593	80aa	ENSP00000404398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGA6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448461.1	ZNF589-005	4703	364aa	ENSP00000404592.1	Nonsense mediated decay	CCDS43085	Q59FS2 Q86UQ0	-	-
ENST00000457782.1	ZNF589-006	3658	89aa	ENSP00000401106.1	Nonsense mediated decay		F8VZ09	-	-
ENST00000454212.1	ZNF589-010	663	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 4,703 bps, Translation length: 364 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86UQ0

CCDS

This transcript is a member of the Human CCDS set: CCDS43085

Version

ENST00000448461.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346128 (version 1)

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Transcript: ENST00000448461.1 ZNF589-005

Summary