Transcript: ENST00000502682.1 APBB2-009

Description

amyloid beta (A4) precursor protein-binding, family B, member 2 [Source:HGNC Symbol;Acc:582]

Gene Synonyms

FE65L, FE65L1, MGC35575

Location

Chromosome 4: 41,067,686-41,218,731 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 59369 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSG00000163697.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508593.1	APBB2-003	3592	759aa	ENSP00000427211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54762	A8K1C3 D6RAE0 D6RAJ4 D6RB00 D6RB55 D6RD19 D6RDY3 D6RGD4 Q5I0G1 Q92870	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295974.8	APBB2-002	8972	758aa	ENSP00000295974.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54761	A8K1C3 D6RAE0 D6RAJ4 D6RB00 D6RB55 D6RD19 D6RDY3 D6RGD4 Q5I0G1 Q92870	NM_004307.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543538.1	APBB2-201	6992	210aa	ENSP00000439357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54760	D6RAJ4 D6RD19 D6RGD4 Q92870	NM_001166054.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513140.1	APBB2-001	4166	736aa	ENSP00000426018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43224	B4DJ88 D6RAE0 D6RB00 D6RB55 D6RDY3 Q92870	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506352.1	APBB2-012	3316	737aa	ENSP00000421539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K1C3 B4DJ88 D6RAE0 D6RAJ4 D6RB00 D6RB55 D6RD19 D6RDY3 D6RGD4 G5E9Y1 Q5I0G1	NM_173075.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513611.1	APBB2-006	2964	728aa	ENSP00000427307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8K1C3 D6RAJ4 D6RB55 D6RD19 D6RDY3 D6RGD4 Q5I0G1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502841.1	APBB2-007	1681	210aa	ENSP00000425802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54760	D6RAJ4 D6RD19 D6RGD4 Q92870	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504305.1	APBB2-025	1274	210aa	ENSP00000423765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54760	D6RAJ4 D6RD19 D6RGD4 Q92870	NM_001166053.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509446.1	APBB2-020	907	140aa	ENSP00000424414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB55 D6RDY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508707.1	APBB2-018	639	68aa	ENSP00000424579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAE0 D6RB00 D6RDY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508676.1	APBB2-010	604	27aa	ENSP00000422723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAE0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510670.1	APBB2-026	591	102aa	ENSP00000427107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAJ4 D6RD19 D6RGD4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514920.1	APBB2-028	550	95aa	ENSP00000421751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAJ4 D6RGD4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503503.1	APBB2-016	544	10aa	ENSP00000421205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512510.1	APBB2-029	539	179aa	ENSP00000426429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAJ4 D6RD19 D6RGD4 H0YA92	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000513516.1	APBB2-027	537	87aa	ENSP00000421301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGD4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503264.1	APBB2-019	493	26aa	ENSP00000425202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513493.1	APBB2-023	426	142aa	ENSP00000425121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510925.1	APBB2-030	701	41aa	ENSP00000422948.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511572.1	APBB2-017	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507831.1	APBB2-024	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506999.1	APBB2-015	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503555.1	APBB2-011	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502682.1	APBB2-009	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505266.1	APBB2-013	446	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504484.1	APBB2-008	2091	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509475.1	APBB2-004	1486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502687.1	APBB2-031	883	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514094.1	APBB2-021	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511120.1	APBB2-022	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 482 bps,

Version

ENST00000502682.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362050 (version 1)

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Transcript: ENST00000502682.1 APBB2-009

Summary