Transcript: ENST00000487522.1 EIF5A2-005

Description

eukaryotic translation initiation factor 5A2 [Source:HGNC Symbol;Acc:3301]

Gene Synonyms

EIF-5A2, eIF5AII

Location

Chromosome 3: 170,611,005-170,626,387 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 6071 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSG00000163577.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295822.2	EIF5A2-001	5593	153aa	ENSP00000295822.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3214	C9J4W5 Q9GZV4	NM_020390.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474096.1	EIF5A2-002	570	105aa	ENSP00000418370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487522.1	EIF5A2-005	565	109aa	ENSP00000418305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7B5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474417.1	EIF5A2-004	457	115aa	ENSP00000417133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4W5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460117.1	EIF5A2-003	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 565 bps, Translation length: 109 residues

Version

ENST00000487522.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352685 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000487522.1 EIF5A2-005

Summary