Transcript: ENST00000474339.1 RNF25-006

Description

ring finger protein 25 [Source:HGNC Symbol;Acc:14662]

Gene Synonyms

AO7, FLJ13906

Location

Chromosome 2: 219,528,890-219,529,624 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 430 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSG00000163481.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295704.2	RNF25-001	1914	459aa	ENSP00000295704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2420	Q96BH1	NM_022453.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423170.1	RNF25-004	624	158aa	ENSP00000403582.1	Nonsense mediated decay		H7C219	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000473034.1	RNF25-002	1807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463188.1	RNF25-003	752	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474339.1	RNF25-006	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497832.1	RNF25-005	385	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 532 bps,

Version

ENST00000474339.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336686 (version 1)

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Transcript: ENST00000474339.1 RNF25-006

Summary