Description
collagen, type VI, alpha 3 [Source:HGNC Symbol;Acc:2213]
Location
Chromosome 2: 238,247,583-238,249,245 reverse strand.
About this transcript
This transcript has 2 exons, is associated with 763 variant alleles and maps to 49 oligo probes.
Gene
This transcript is a product of gene ENSG00000163359.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000295550.4 | COL6A3-001 | 10749 | 3177aa | ENSP00000295550.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33412 | D9ZGF2 P12111 Q8N4Z1 | NM_004369.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000347401.3 | COL6A3-202 | 9978 | 2976aa | ENSP00000315609.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENL6 Q8N4Z1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000353578.4 | COL6A3-203 | 9963 | 2971aa | ENSP00000315873.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33409 | P12111 Q8N4Z1 | NM_057167.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000346358.4 | COL6A3-201 | 9219 | 2977aa | ENSP00000295546.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JNG9 E9PCV6 Q8N4Z1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000409809.1 | COL6A3-011 | 8916 | 2971aa | ENSP00000386844.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33409 | P12111 Q8N4Z1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000472056.1 | COL6A3-012 | 8628 | 2570aa | ENSP00000418285.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33410 | P12111 Q8N4Z1 | NM_057166.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000392004.3 | COL6A3-002 | 4037 | 1237aa | ENSP00000375861.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33411 | P12111 | NM_057165.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000392003.2 | COL6A3-003 | 3464 | 1036aa | ENSP00000375860.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54439 | P12111 | NM_057164.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000433762.1 | COL6A3-008 | 2379 | 708aa | ENSP00000389539.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JNG9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000491233.1 | COL6A3-004 | 652 | 173aa | ENSP00000460277.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L392 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000473258.1 | COL6A3-005 | 5433 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493608.1 | COL6A3-006 | 742 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491769.1 | COL6A3-009 | 6731 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493475.2 | COL6A3-007 | 669 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468792.1 | COL6A3-010 | 329 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |