Transcript: ENST00000508591.1 HELQ-003

Description

helicase, POLQ-like [Source:HGNC Symbol;Acc:18536]

Gene Synonyms

HEL308, Hel308

Location

About this transcript

This transcript has 17 exons, is annotated with 6 domains and features, is associated with 20519 variant alleles and maps to 688 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295488.3	HELQ-001	3579	1101aa	ENSP00000295488.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3603	Q8TDG4	NM_133636.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510985.1	HELQ-002	3315	1034aa	ENSP00000424539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E3W980	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508591.1	HELQ-003	3429	489aa	ENSP00000424186.1	Nonsense mediated decay		E3W982	-	-
ENST00000440639.2	HELQ-007	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512539.1	HELQ-004	631	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515482.1	HELQ-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 6, Transcript length: 3,429 bps, Translation length: 489 residues

Version

ENST00000508591.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363956 (version 1)