Transcript: ENST00000394241.3 TGFA-012

Description

transforming growth factor, alpha [Source:HGNC Symbol;Acc:11765]

Gene Synonyms

TFGA

Location

Chromosome 2: 70,683,471-70,781,105 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 40959 variant alleles and maps to 175 oligo probes.

Gene

This transcript is a product of gene ENSG00000163235.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295400.6	TGFA-001	4310	160aa	ENSP00000295400.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1905	P01135 Q6QBS1 Q9UIS3 Q9UQ91	NM_003236.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418333.2	TGFA-016	1225	159aa	ENSP00000404099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46316	F8WA74 P01135 Q6QBS1 Q9UIS3 Q9UQ91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444975.1	TGFA-002	985	166aa	ENSP00000404131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNR3 Q6QBS1 Q9UIS3 Q9UQ91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450929.1	TGFA-003	950	165aa	ENSP00000414127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EPT6 Q6QBS1 Q9UIS3 Q9UQ91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445399.1	TGFA-005	812	161aa	ENSP00000387493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WA74 P01135 Q6QBS1 Q9UIS2 Q9UQ91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419940.1	TGFA-006	681	131aa	ENSP00000407432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6QBS1 Q9UIS1 Q9UQ91	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394241.3	TGFA-012	568	120aa	ENSP00000377787.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WA74 Q6QBS1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460808.1	TGFA-015	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474101.1	TGFA-010	147	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 568 bps, Translation length: 120 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000394241.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330076 (version 36)

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Transcript: ENST00000394241.3 TGFA-012

Summary