Transcript: ENST00000602841.1 SCNM1-007

Description

sodium channel modifier 1 [Source:HGNC Symbol;Acc:23136]

Gene Synonyms

MGC3180

Location

About this transcript

This transcript has 7 exons, is annotated with 3 domains and features, is associated with 5849 variant alleles and maps to 376 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368905.4	SCNM1-001	2016	230aa	ENSP00000357901.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS987	Q9BWG6	NM_024041.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368902.1	SCNM1-004	869	195aa	ENSP00000357898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55636	Q9BWG6	-	-
ENST00000602841.1	SCNM1-007	749	195aa	ENSP00000473282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55636	Q9BWG6	-	-
ENST00000461862.1	SCNM1-002	1094	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497147.1	SCNM1-006	862	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459799.1	SCNM1-005	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471039.1	SCNM1-003	618	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 749 bps, Translation length: 195 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BWG6

CCDS

This transcript is a member of the Human CCDS set: CCDS55636

Version

ENST00000602841.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467608 (version 1)