Transcript: ENST00000494378.1 B3GALNT2-004

Description

beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:28596]

Gene Synonyms

B3GalNAc-T2, MDDGA11, MGC39558

Location

Chromosome 1: 235,642,224-235,667,725 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 11071 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSG00000162885.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366600.3	B3GALNT2-001	2015	500aa	ENSP00000355559.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1606	Q8NCR0	NM_152490.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313984.3	B3GALNT2-002	1874	326aa	ENSP00000315678.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60453	Q8NCR0	NM_001277155.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478199.2	B3GALNT2-003	3094	92aa	ENSP00000477160.1	Nonsense mediated decay		-	-	-
ENST00000494378.1	B3GALNT2-004	1869	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477694.1	B3GALNT2-005	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461994.1	B3GALNT2-006	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462374.1	B3GALNT2-007	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,869 bps,

Version

ENST00000494378.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000097379 (version 2)

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Transcript: ENST00000494378.1 B3GALNT2-004

Summary