Transcript: ENST00000478502.1 PEF1-002

Description

penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:30009]

Gene Synonyms

ABP32, PEF1A

Location

Chromosome 1: 32,096,050-32,110,497 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 5934 variant alleles and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSG00000162517.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373703.4	PEF1-001	1629	284aa	ENSP00000362807.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS345	Q9UBV8	NM_012392.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440872.2	PEF1-201	992	140aa	ENSP00000411934.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETX1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492061.1	PEF1-004	936	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489164.1	PEF1-003	865	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478502.1	PEF1-002	750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496805.1	PEF1-005	742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461006.1	PEF1-008	732	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472443.1	PEF1-006	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471219.1	PEF1-007	401	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 750 bps,

Version

ENST00000478502.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000011047 (version 1)

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Transcript: ENST00000478502.1 PEF1-002

Summary