Transcript: ENST00000599293.1 EMC10-005

Description

ER membrane protein complex subunit 10 [Source:HGNC Symbol;Acc:27609]

Gene Synonyms

C19orf63, HSM1, HSS1, INM02

Location

Chromosome 19: 50,979,791-50,986,577 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 4097 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000161671.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334976.6	EMC10-001	1904	262aa	ENSP00000334037.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12796	Q5UCC4	NM_206538.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376918.3	EMC10-002	2014	254aa	ENSP00000366117.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42594	Q5UCC4	NM_175063.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598585.1	EMC10-003	1610	371aa	ENSP00000472420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2A0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597799.1	EMC10-008	462	88aa	ENSP00000471764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R1B7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597426.1	EMC10-009	180	43aa	ENSP00000470949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R030	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601780.1	EMC10-006	2178	42aa	ENSP00000470164.1	Nonsense mediated decay		M0QYY4	-	-
ENST00000599293.1	EMC10-005	1926	42aa	ENSP00000472714.1	Nonsense mediated decay		M0QYY4	-	-
ENST00000594508.1	EMC10-007	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 1, Transcript length: 1,926 bps, Translation length: 42 residues

Version

ENST00000599293.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000464764 (version 1)

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Transcript: ENST00000599293.1 EMC10-005

Summary