Transcript: ENST00000494866.1 ADAR-006

Description

adenosine deaminase, RNA-specific [Source:HGNC Symbol;Acc:225]

Gene Synonyms

ADAR1, AGS6, DRADA, DSH, DSRAD, G1P1, IFI-4, IFI4, K88DSRBP, P136

Location

Chromosome 1: 154,574,554-154,600,388 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 11179 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000160710.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368474.4	ADAR-001	6620	1226aa	ENSP00000357459.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1071	P55265	NM_015841.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292205.5	ADAR-201	6554	1269aa	ENSP00000292205.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENU4	NM_001193495.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368471.3	ADAR-002	6515	931aa	ENSP00000357456.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30879	P55265	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529168.1	ADAR-007	3585	1195aa	ENSP00000431794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DV75 H0YCK3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000471068.1	ADAR-005	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526905.1	ADAR-008	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494866.1	ADAR-006	471	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463920.1	ADAR-003	2347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534279.1	ADAR-009	849	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492630.1	ADAR-004	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530954.1	ADAR-010	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 471 bps,

Version

ENST00000494866.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000090696 (version 1)

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Transcript: ENST00000494866.1 ADAR-006

Summary