Transcript: ENST00000291554.2 CRYAA-001

Description

crystallin, alpha A [Source:HGNC Symbol;Acc:2388]

Gene Synonyms

CRYA1, CTRCT9, HSPB4

Location

Chromosome 21: 44,589,118-44,592,915 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 1355 variant alleles and maps to 334 oligo probes.

Gene

This transcript is a product of gene ENSG00000160202.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291554.2	CRYAA-001	1139	173aa	ENSP00000291554.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13695	P02489 Q71V83	NM_000394.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398132.1	CRYAA-004	826	136aa	ENSP00000381200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHE4 Q71V83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398133.1	CRYAA-003	600	153aa	ENSP00000381201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EWH7 Q71V83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482775.1	CRYAA-002	1128	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468016.1	CRYAA-005	981	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,139 bps, Translation length: 173 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02489

CCDS

This transcript is a member of the Human CCDS set: CCDS13695

Version

ENST00000291554.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000195562 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000291554.2 CRYAA-001

Summary