Transcript: ENST00000373602.5 CCDC28B-002

Description

coiled-coil domain containing 28B [Source:HGNC Symbol;Acc:28163]

Gene Synonyms

MGC1203, RP4-622L5.5

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 2369 variant alleles and maps to 287 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373602.5	CCDC28B-002	1089	200aa	ENSP00000362704.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS354	Q9BUN5	NM_024296.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421922.2	CCDC28B-001	1415	241aa	ENSP00000413017.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BUN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469003.1	CCDC28B-003	1235	83aa	ENSP00000435036.1	Nonsense mediated decay		E9PM03	-	-
ENST00000461819.1	CCDC28B-005	780	129aa	ENSP00000431257.1	Nonsense mediated decay		E9PM81	-	-
ENST00000483009.1	CCDC28B-004	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,089 bps, Translation length: 200 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BUN5

CCDS

This transcript is a member of the Human CCDS set: CCDS354

Version

ENST00000373602.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000015723 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.