Transcript: ENST00000290942.5 TPPP3-002

Description

tubulin polymerization-promoting protein family member 3 [Source:HGNC Symbol;Acc:24162]

Gene Synonyms

CGI-38, TPPP/p20, p20, p25gamma

Location

Chromosome 16: 67,423,728-67,427,421 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 1679 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSG00000159713.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564104.1	TPPP3-003	1736	176aa	ENSP00000462435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10835	Q9BW30	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562206.1	TPPP3-004	1410	176aa	ENSP00000457275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10835	Q9BW30	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000290942.5	TPPP3-002	1116	176aa	ENSP00000290942.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10835	Q9BW30	NM_016140.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393957.2	TPPP3-001	1058	176aa	ENSP00000377529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10835	Q9BW30	NM_015964.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561537.1	TPPP3-005	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,116 bps, Translation length: 176 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BW30

CCDS

This transcript is a member of the Human CCDS set: CCDS10835

Version

ENST00000290942.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268837 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000290942.5 TPPP3-002

Summary