Transcript: ENST00000562915.1 TEPP-003

Description

testis, prostate and placenta expressed [Source:HGNC Symbol;Acc:33745]

Location

About this transcript

This transcript has 3 exons, is associated with 1465 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290871.5	TEPP-001	1079	298aa	ENSP00000290871.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10790	Q6URK8	NM_199046.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441824.2	TEPP-002	998	271aa	ENSP00000401917.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45496	Q6URK8	NM_199456.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569996.1	TEPP-004	680	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562915.1	TEPP-003	2360	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,360 bps,

Version

ENST00000562915.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000431988 (version 1)