Transcript: ENST00000560563.1 ACTC1-004

Description

actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:143]

Gene Synonyms

ACTC, ASD5, CMD1R, CMH11, LVNC4

Location

About this transcript

This transcript has 2 exons, is associated with 491 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290378.4	ACTC1-001	4106	377aa	ENSP00000290378.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10041	B3KPP5 P68032	NM_005159.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557860.1	ACTC1-003	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560563.1	ACTC1-004	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 696 bps,

Version

ENST00000560563.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417525 (version 1)