Transcript: ENST00000490563.1 CCDC24-004

Description

coiled-coil domain containing 24 [Source:HGNC Symbol;Acc:28688]

Gene Synonyms

MGC45441, RP5-1198O20.2

Location

Chromosome 1: 44,457,338-44,462,200 forward strand.

About this transcript

This transcript has 8 exons, is associated with 2670 variant alleles and maps to 503 oligo probes.

Gene

This transcript is a product of gene ENSG00000159214.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372318.3	CCDC24-001	1463	307aa	ENSP00000361392.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS507	Q8N4L8	NM_152499.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466180.1	CCDC24-008	697	220aa	ENSP00000476456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486064.1	CCDC24-002	2654	96aa	ENSP00000476661.1	Nonsense mediated decay		-	-	-
ENST00000463846.1	CCDC24-003	1230	59aa	ENSP00000476322.1	Nonsense mediated decay		Q6MZH0	-	-
ENST00000486504.1	CCDC24-006	860	65aa	ENSP00000476589.1	Nonsense mediated decay		-	-	-
ENST00000460543.1	CCDC24-011	773	96aa	ENSP00000476285.1	Nonsense mediated decay		-	-	-
ENST00000490064.1	CCDC24-005	728	59aa	ENSP00000476914.1	Nonsense mediated decay		Q6MZH0	-	-
ENST00000479055.1	CCDC24-009	789	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472562.1	CCDC24-010	400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490563.1	CCDC24-004	1659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485811.1	CCDC24-007	982	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,659 bps,

Version

ENST00000490563.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000022868 (version 1)

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Transcript: ENST00000490563.1 CCDC24-004

Summary