Transcript: ENST00000508274.1 RAB28-003

Description

RAB28, member RAS oncogene family [Source:HGNC Symbol;Acc:9768]

Gene Synonyms

CORD18

Location

Chromosome 4: 13,369,348-13,485,955 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 51646 variant alleles and maps to 432 oligo probes.

Gene

This transcript is a product of gene ENSG00000157869.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330852.5	RAB28-001	1715	221aa	ENSP00000328551.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33961	P51157	NM_001017979.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288723.4	RAB28-002	1810	220aa	ENSP00000288723.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3409	P51157	NM_004249.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338176.4	RAB28-201	1787	204aa	ENSP00000340079.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54741	P51157	NM_001159601.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511649.1	RAB28-006	715	143aa	ENSP00000424899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504644.1	RAB28-008	405	74aa	ENSP00000422816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510528.1	RAB28-005	193	51aa	ENSP00000424091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508274.1	RAB28-003	1551	95aa	ENSP00000424043.1	Nonsense mediated decay		Q8WVF3	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,551 bps, Translation length: 95 residues

Version

ENST00000508274.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000359157 (version 1)

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Transcript: ENST00000508274.1 RAB28-003

Summary