Transcript: ENST00000378482.2 TSPAN7-001

Description

tetraspanin 7 [Source:HGNC Symbol;Acc:11854]

Gene Synonyms

A15, CCG-B7, CD231, DXS1692E, MRX58, MXS1, TALLA-1, TM4SF2, TM4SF2b

Location

Chromosome X: 38,420,623-38,548,167 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 33714 variant alleles and maps to 439 oligo probes.

Gene

This transcript is a product of gene ENSG00000156298.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378482.2	TSPAN7-001	1909	249aa	ENSP00000367743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14248	P41732 Q7Z2D9 Q7Z2E9 Q7Z2I5 Q7Z2J5 Q7Z3Z6	NM_004615.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000286824.6	TSPAN7-005	1270	266aa	ENSP00000286824.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DDG0 Q7Z2D9 Q7Z2E9 Q7Z2I5 Q7Z2J5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545599.1	TSPAN7-202	1224	223aa	ENSP00000441540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEB8 Q7Z2D9 Q7Z2E9 Q7Z2I5 Q7Z2J5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422612.2	TSPAN7-201	1210	275aa	ENSP00000388954.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEA5 Q7Z2D9 Q7Z2E9 Q7Z2I5 Q7Z2J5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475216.1	TSPAN7-004	1224	45aa	ENSP00000418586.1	Nonsense mediated decay		F8WC96	-	-
ENST00000471410.1	TSPAN7-003	1210	63aa	ENSP00000419290.1	Nonsense mediated decay		F8WF53	-	-
ENST00000480976.1	TSPAN7-008	553	43aa	ENSP00000419321.1	Nonsense mediated decay		F8WF47	-	-
ENST00000488893.1	TSPAN7-002	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494037.1	TSPAN7-009	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000419600.2	TSPAN7-006	1678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,909 bps, Translation length: 249 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41732

CCDS

This transcript is a member of the Human CCDS set: CCDS14248

Version

ENST00000378482.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356412 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000378482.2 TSPAN7-001

Summary