Transcript: ENST00000565590.1 ZKSCAN2-003

Description

zinc finger with KRAB and SCAN domains 2 [Source:HGNC Symbol;Acc:25677]

Gene Synonyms

FLJ23199, ZNF694, ZSCAN31, ZSCAN34

Location

About this transcript

This transcript has 5 exons, is associated with 5238 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328086.7	ZKSCAN2-001	7523	967aa	ENSP00000331626.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32410	Q63HK3	NM_001012981.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569150.1	ZKSCAN2-002	3667	232aa	ENSP00000455586.1	Nonsense mediated decay		H3BQ35	-	-
ENST00000565590.1	ZKSCAN2-003	2332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,332 bps,

Version

ENST00000565590.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435742 (version 1)