Transcript: ENST00000538576.1 SLC16A1-202

Description

solute carrier family 16 (monocarboxylate transporter), member 1 [Source:HGNC Symbol;Acc:10922]

Gene Synonyms

HHF7, MCT, MCT1

Location

Chromosome 1: 113,454,474-113,498,685 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 23 domains and features, is associated with 19306 variant alleles and maps to 613 oligo probes.

Gene

This transcript is a product of gene ENSG00000155380.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000538576.1	SLC16A1-202	4374	500aa	ENSP00000441065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS858	P53985 Q5T8R3 Q5T8R4 Q5T8R5	NM_001166496.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369626.3	SLC16A1-001	3910	500aa	ENSP00000358640.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS858	P53985 Q5T8R3 Q5T8R4 Q5T8R5	NM_003051.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433570.4	SLC16A1-201	3117	430aa	ENSP00000445061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q49A45 Q5T8R3 Q5T8R4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458229.1	SLC16A1-002	2201	456aa	ENSP00000416167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8R3 Q5T8R4 Q5T8R5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443580.1	SLC16A1-005	1099	296aa	ENSP00000399104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8R3 Q5T8R4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429288.1	SLC16A1-003	865	215aa	ENSP00000397106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T8R4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478835.1	SLC16A1-004	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481750.1	SLC16A1-006	430	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 4,374 bps, Translation length: 500 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P53985

CCDS

This transcript is a member of the Human CCDS set: CCDS858

Version

ENST00000538576.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000033539 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000538576.1 SLC16A1-202

Summary