Transcript: ENST00000431078.1 CNTNAP5-001

Description

contactin associated protein-like 5 [Source:HGNC Symbol;Acc:18748]

Gene Synonyms

CASPR5, FLJ31966, caspr5

Location

About this transcript

This transcript has 24 exons, is annotated with 44 domains and features, is associated with 420036 variant alleles and maps to 671 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000431078.1	CNTNAP5-001	5284	1306aa	ENSP00000399013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46401	Q8WYK1	NM_130773.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423939.2	CNTNAP5-004	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470921.1	CNTNAP5-003	347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 5,284 bps, Translation length: 1,306 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WYK1

CCDS

This transcript is a member of the Human CCDS set: CCDS46401

Version

ENST00000431078.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000330864 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.