Transcript: ENST00000486002.1 ATP5J-008

Description

ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 [Source:HGNC Symbol;Acc:847]

Gene Synonyms

ATP5, ATP5A, ATPM, CF6, F6

Location

Chromosome 21: 27,097,009-27,107,215 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 4683 variant alleles and maps to 298 oligo probes.

Gene

This transcript is a product of gene ENSG00000154723.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000457143.2	ATP5J-003	589	116aa	ENSP00000389649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46637	P18859 Q6IB54	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400093.3	ATP5J-002	1179	108aa	ENSP00000382965.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13574	P18859 Q6IB54	NM_001685.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400087.3	ATP5J-006	826	108aa	ENSP00000382959.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13574	P18859 Q6IB54	NM_001003696.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400090.3	ATP5J-005	647	108aa	ENSP00000382962.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13574	P18859 Q6IB54	NM_001003697.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284971.3	ATP5J-001	614	108aa	ENSP00000284971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13574	P18859 Q6IB54	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400094.1	ATP5J-007	589	108aa	ENSP00000382966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13574	P18859 Q6IB54	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400099.1	ATP5J-004	492	119aa	ENSP00000382971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MUH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486002.1	ATP5J-008	876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 876 bps,

Version

ENST00000486002.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000171363 (version 1)

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Transcript: ENST00000486002.1 ATP5J-008

Summary