Transcript: ENST00000400546.1 NCAM2-001

Description

neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:7657]

Gene Synonyms

MGC51008, NCAM21

Location

Chromosome 21: 22,370,633-22,915,650 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 55 domains and features, is associated with 262695 variant alleles and maps to 746 oligo probes.

Gene

This transcript is a product of gene ENSG00000154654.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400546.1	NCAM2-001	8135	837aa	ENSP00000383392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42910	D3DSC5 O15394	NM_004540.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284894.7	NCAM2-201	2088	695aa	ENSP00000284894.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KV31	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535285.1	NCAM2-202	1494	424aa	ENSP00000441887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z841	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486367.1	NCAM2-004	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461281.1	NCAM2-003	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484983.1	NCAM2-002	340	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 8,135 bps, Translation length: 837 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15394

CCDS

This transcript is a member of the Human CCDS set: CCDS42910

Version

ENST00000400546.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000170915 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000400546.1 NCAM2-001

Summary