Transcript: ENST00000394113.1 CERS3-002

Description

ceramide synthase 3 [Source:HGNC Symbol;Acc:23752]

Gene Synonyms

ARCI9, LASS3, MGC27091

Location

Chromosome 15: 100,942,716-101,084,618 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 67153 variant alleles and maps to 428 oligo probes.

Gene

This transcript is a product of gene ENSG00000154227.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284382.4	CERS3-001	3894	383aa	ENSP00000284382.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10384	H0YMG6 H0YN05 Q8IU89	NM_178842.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394113.1	CERS3-002	2045	383aa	ENSP00000377672.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10384	H0YMG6 H0YN05 Q8IU89	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538112.2	CERS3-005	1856	383aa	ENSP00000437640.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10384	H0YMG6 H0YN05 Q8IU89	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558884.2	CERS3-004	920	162aa	ENSP00000453816.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMG6 H0YN05	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559639.1	CERS3-006	432	15aa	ENSP00000453598.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMG6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560944.1	CERS3-009	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559023.1	CERS3-007	974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560348.1	CERS3-011	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 10, Transcript length: 2,045 bps, Translation length: 383 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IU89

CCDS

This transcript is a member of the Human CCDS set: CCDS10384

Version

ENST00000394113.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000313594 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000394113.1 CERS3-002

Summary