Transcript: ENST00000581714.1 CHST9-002

Description

carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 [Source:HGNC Symbol;Acc:19898]

Gene Synonyms

GALNAC-4-ST2, GALNAC4ST-2

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 92547 variant alleles and maps to 382 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284224.8	CHST9-001	2238	443aa	ENSP00000284224.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42422	Q7L1S5	NM_031422.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581714.1	CHST9-002	2043	443aa	ENSP00000462852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42422	Q7L1S5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580774.1	CHST9-003	2033	74aa	ENSP00000464655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58618	Q7L1S5	NM_001256316.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,043 bps, Translation length: 443 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7L1S5

CCDS

This transcript is a member of the Human CCDS set: CCDS42422

Version

ENST00000581714.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446550 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.