Transcript: ENST00000284110.1 HS3ST3A1-001

Description

heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:5196]

Gene Synonyms

30ST3A1, 3OST3A1, HS3ST3A

Location

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 48583 variant alleles and maps to 298 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284110.1	HS3ST3A1-001	2527	406aa	ENSP00000284110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11165	J3KSX5 Q9Y663	NM_006042.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578576.1	HS3ST3A1-002	750	204aa	ENSP00000462696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSX5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,527 bps, Translation length: 406 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y663

CCDS

This transcript is a member of the Human CCDS set: CCDS11165

Version

ENST00000284110.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000129952 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.