Transcript: ENST00000518458.1 CETN3-006

Description

centrin, EF-hand protein, 3 [Source:HGNC Symbol;Acc:1868]

Gene Synonyms

CDC31, CEN3

Location

Chromosome 5: 89,689,750-89,703,647 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 5438 variant alleles and maps to 357 oligo probes.

Gene

This transcript is a product of gene ENSG00000153140.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283122.3	CETN3-001	2432	167aa	ENSP00000283122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4066	H0YBL5 O15182	NM_004365.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522083.1	CETN3-002	1026	191aa	ENSP00000428259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJF8 H0YBL5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522565.1	CETN3-004	867	156aa	ENSP00000430409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK82 H0YBL5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522864.1	CETN3-003	738	153aa	ENSP00000430361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM2 H0YBL5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522842.1	CETN3-005	664	111aa	ENSP00000429875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH67 H0YBL5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518458.1	CETN3-006	610	81aa	ENSP00000429772.1	Nonsense mediated decay		H0YBL5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 610 bps, Translation length: 81 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000518458.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381397 (version 1)

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Transcript: ENST00000518458.1 CETN3-006

Summary