Transcript: ENST00000507025.1 PRDM8-011

Description

PR domain containing 8 [Source:HGNC Symbol;Acc:13993]

Gene Synonyms

PFM5

Location

Chromosome 4: 81,106,522-81,117,651 forward strand.

About this transcript

This transcript has 5 exons, is associated with 5073 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000152784.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339711.4	PRDM8-201	4095	689aa	ENSP00000339764.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43243	E9PEH0 Q05CA1 Q9NQV8	NM_020226.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504452.1	PRDM8-003	3706	689aa	ENSP00000423985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43243	E9PEH0 Q05CA1 Q9NQV8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415738.2	PRDM8-001	3124	689aa	ENSP00000406998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43243	E9PEH0 Q05CA1 Q9NQV8	NM_001099403.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515013.1	PRDM8-004	2514	427aa	ENSP00000425149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEH0 Q05CA1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508061.2	PRDM8-010	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511825.1	PRDM8-009	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508965.1	PRDM8-005	649	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507025.1	PRDM8-011	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509375.1	PRDM8-006	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506547.1	PRDM8-008	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 634 bps,

Version

ENST00000507025.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362801 (version 1)

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Transcript: ENST00000507025.1 PRDM8-011

Summary