Transcript: ENST00000554729.1 SLC35F4-001

Description

solute carrier family 35, member F4 [Source:HGNC Symbol;Acc:19845]

Gene Synonyms

C14orf36, FLJ37712, c14_5373

Location

Chromosome 14: 58,030,696-58,063,615 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 15541 variant alleles and maps to 287 oligo probes.

Gene

This transcript is a product of gene ENSG00000151812.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000339762.6	SLC35F4-201	1779	521aa	ENSP00000342518.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IF30	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556826.1	SLC35F4-004	1908	485aa	ENSP00000452086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V4Z9	NM_001206920.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554729.1	SLC35F4-001	1608	362aa	ENSP00000451990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IF30	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557254.1	SLC35F4-007	2700	151aa	ENSP00000450836.1	Nonsense mediated decay	G3V2S4	-	-
ENST00000556306.1	SLC35F4-008	467	46aa	ENSP00000452196.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557430.1	SLC35F4-003	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000556568.1	SLC35F4-005	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000554648.1	SLC35F4-006	358	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,608 bps, Translation length: 362 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A4IF30

Version

ENST00000554729.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412954 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000554729.1 SLC35F4-001

Summary