Transcript: ENST00000515401.1 ADAMTS12-003

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 12 [Source:HGNC Symbol;Acc:14605]

Gene Synonyms

PRO4389

Location

Chromosome 5: 33,751,303-33,892,124 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 57435 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000151388.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504830.1	ADAMTS12-002	8774	1594aa	ENSP00000422554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34140	P58397	NM_030955.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352040.3	ADAMTS12-001	4622	1509aa	ENSP00000344847.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P58397	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515401.1	ADAMTS12-003	1003	232aa	ENSP00000421638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REX0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504582.1	ADAMTS12-006	2743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506952.1	ADAMTS12-005	789	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509762.1	ADAMTS12-004	707	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,003 bps, Translation length: 232 residues

Version

ENST00000515401.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs1530507, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-JPT.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367165 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000515401.1 ADAMTS12-003

Summary