Transcript: ENST00000413780.1 THRB-011

Description

thyroid hormone receptor, beta [Source:HGNC Symbol;Acc:11799]

Gene Synonyms

C-ERBA-2, C-ERBA-BETA, ERBA-BETA, ERBA2, GRTH, NR1A2, PRTH, THR1, THRB1, THRB2

Location

Chromosome 3: 24,188,209-24,536,496 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 152564 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSG00000151090.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396671.2	THRB-201	7459	461aa	ENSP00000379904.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	C9JHC2 C9JJM3 C9JNQ4 C9JTN1 C9JZS5 F1D8N7 J3KR21 P10828	NM_001128176.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356447.4	THRB-001	6341	461aa	ENSP00000348827.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	C9JHC2 C9JJM3 C9JNQ4 C9JTN1 C9JZS5 F1D8N7 J3KR21 P10828	NM_001128177.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416420.1	THRB-004	2571	461aa	ENSP00000414444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	C9JHC2 C9JJM3 C9JNQ4 C9JTN1 C9JZS5 F1D8N7 J3KR21 P10828	NM_001252634.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280696.5	THRB-003	1718	476aa	ENSP00000280696.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P10828	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413780.1	THRB-011	896	132aa	ENSP00000414100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNQ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447875.1	THRB-006	754	122aa	ENSP00000388467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2 C9JJM3 C9JTN1 C9JZS5 J3KR21 P10828	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453729.2	THRB-002	703	121aa	ENSP00000414910.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2 C9JJM3 C9JTN1 C9JZS5 J3KR21	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415021.1	THRB-005	671	122aa	ENSP00000404898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2 C9JJM3 C9JTN1 C9JZS5 J3KR21 P10828	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418247.1	THRB-012	592	63aa	ENSP00000393932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447414.1	THRB-010	575	103aa	ENSP00000399573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2 C9JTN1 C9JZS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431815.1	THRB-008	568	114aa	ENSP00000395362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2 C9JJM3 C9JTN1 C9JZS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428492.1	THRB-009	539	67aa	ENSP00000404233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2 C9JZS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 896 bps, Translation length: 132 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000413780.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341389 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000413780.1 THRB-011

Summary