Transcript: ENST00000513622.1 MTMR12-005

Description

myotubularin related protein 12 [Source:HGNC Symbol;Acc:18191]

Gene Synonyms

3-PAP, 3PAP, FLJ20476, KIAA1682, PIP3AP

Location

Chromosome 5: 32,271,939-32,313,030 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 17507 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSG00000150712.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382142.3	MTMR12-001	5187	747aa	ENSP00000371577.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34138	Q9C0I1	NM_001040446.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280285.5	MTMR12-003	4966	693aa	ENSP00000280285.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0I1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264934.5	MTMR12-002	2215	637aa	ENSP00000264934.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0I1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505419.1	MTMR12-004	671	38aa	ENSP00000426028.1	Nonsense mediated decay		D6RHK0	-	-
ENST00000513622.1	MTMR12-005	561	39aa	ENSP00000426912.1	Nonsense mediated decay		D6RE76	-	-
ENST00000510216.1	MTMR12-007	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504049.1	MTMR12-006	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 561 bps, Translation length: 39 residues

Version

ENST00000513622.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366583 (version 1)

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Transcript: ENST00000513622.1 MTMR12-005

Summary