Transcript: ENST00000553607.1 TBX6-002

Description

T-box 6 [Source:HGNC Symbol;Acc:11605]

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 2168 variant alleles and maps to 320 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395224.2	TBX6-001	1803	436aa	ENSP00000378650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10670	O95947	NM_004608.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553607.1	TBX6-002	2162	295aa	ENSP00000461223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HA44	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000279386.2	TBX6-201	1796	436aa	ENSP00000279386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10670	O95947	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567664.1	TBX6-003	1543	295aa	ENSP00000460425.1	Nonsense mediated decay		Q9HA44	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,162 bps, Translation length: 295 residues

Version

ENST00000553607.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410856 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.