Transcript: ENST00000522532.1 NDUFB9-002

Description

NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa [Source:HGNC Symbol;Acc:7704]

Gene Synonyms

B22, CI-B22, LYRM3, UQOR22

Location

Chromosome 8: 125,551,381-125,580,751 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 13144 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000147684.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276689.3	NDUFB9-001	711	179aa	ENSP00000276689.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6352	Q5JVG7 Q9Y6M9	NM_005005.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522532.1	NDUFB9-002	1319	221aa	ENSP00000431115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PF49 Q5JVG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518008.1	NDUFB9-003	789	178aa	ENSP00000428282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EWZ0 Q5JVG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517367.1	NDUFB9-004	636	168aa	ENSP00000430322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PH64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517830.1	NDUFB9-007	320	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518657.1	NDUFB9-005	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524241.1	NDUFB9-006	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,319 bps, Translation length: 221 residues

Version

ENST00000522532.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs6470252, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381608 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000522532.1 NDUFB9-002

Summary