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Human (GRCh37.p13)
Description

zonadhesin (gene/pseudogene) [Source:HGNC Symbol;Acc:12857]

About this transcript

This transcript has 47 exons, is associated with 34469 variant alleles and maps to 1136 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000546292.1ZAN-20483752720aaENSP00000445943.1
 
Protein coding
F5H0T8 NM_173059.1Ensembl CanonicalGENCODE basic
ENST00000542585.1ZAN-20287132688aaENSP00000444427.1
 
Protein coding
F5GZI5 NM_003386.1GENCODE basic
ENST00000538115.1ZAN-20185142623aaENSP00000445091.1
 
Protein coding
F5H4B5 -GENCODE basic
ENST00000546213.1ZAN-20380361184aaENSP00000441117.1
 
Protein coding
F5GX59 -GENCODE basic
ENST00000427578.1ZAN-00288342724aaENSP00000425200.1
 
Polymorphic pseudogene
Q9Y493 -GENCODE basic
ENST00000449052.1ZAN-00587332689aaENSP00000422208.1
 
Polymorphic pseudogene
Q9Y493 -GENCODE basic
ENST00000349350.6ZAN-00186682812aaENSP00000422387.1
 
Polymorphic pseudogene
Q9Y493 -GENCODE basic
ENST00000443370.1ZAN-00385342624aaENSP00000421245.1
 
Polymorphic pseudogene
Q9Y493 -GENCODE basic
ENST00000421100.1ZAN-00484692601aaENSP00000425454.1
 
Polymorphic pseudogene
Q9Y493 -GENCODE basic
ENST00000348028.3ZAN-00683952721aaENSP00000423579.1
 
Polymorphic pseudogene
Q9Y493 -GENCODE basic
Statistics

Exons: 47, Coding exons: 42, Transcript length: 8,834 bps, Translation length: 2,724 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y493

Version

ENST00000427578.1

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs72364644, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) ESP6500:European_American, ESP6500:African_American.
This transcript has a variant, rs369526619, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) ESP6500:African_American, ESP6500:European_American.
This transcript has a variant, rs2293766, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HAPMAP-CHD, CSHL-HAPMAP:HapMap-HCB.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000347210 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.