Transcript: ENST00000274793.7 PLA2G7-001

Description

phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:HGNC Symbol;Acc:9040]

Gene Synonyms

LDL-PLA2, LP-PLA2, PAFAD, PAFAH

Location

Chromosome 6: 46,671,938-46,703,079 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 14260 variant alleles and maps to 478 oligo probes.

Gene

This transcript is a product of gene ENSG00000146070.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274793.7	PLA2G7-001	1882	441aa	ENSP00000274793.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4917	Q13093	NM_005084.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537365.1	PLA2G7-201	1747	441aa	ENSP00000445666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4917	Q13093	NM_001168357.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538237.1	PLA2G7-202	1709	219aa	ENSP00000441416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DLM5 F5GYY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541026.1	PLA2G7-203	1210	137aa	ENSP00000444164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DLM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,882 bps, Translation length: 441 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13093

CCDS

This transcript is a member of the Human CCDS set: CCDS4917

Version

ENST00000274793.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040802 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000274793.7 PLA2G7-001

Summary