Transcript: ENST00000506644.3 ZMAT2-003

Description

zinc finger, matrin-type 2 [Source:HGNC Symbol;Acc:26433]

Gene Synonyms

FLJ31121, Ptg-12, Snu23, hSNU23

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 2314 variant alleles and maps to 306 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274712.3	ZMAT2-001	1634	199aa	ENSP00000274712.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4239	Q96NC0 R4GMX9	NM_144723.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519913.2	ZMAT2-002	521	53aa	ENSP00000473397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMX9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506644.3	ZMAT2-003	735	129aa	ENSP00000473644.1	Nonsense mediated decay		R4GNG8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 735 bps, Translation length: 129 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000506644.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372879 (version 3)