Transcript: ENST00000274712.3 ZMAT2-001

Description

zinc finger, matrin-type 2 [Source:HGNC Symbol;Acc:26433]

Gene Synonyms

FLJ31121, Ptg-12, Snu23, hSNU23

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 2671 variant alleles and maps to 407 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274712.3	ZMAT2-001	1634	199aa	ENSP00000274712.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4239	Q96NC0 R4GMX9	NM_144723.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519913.2	ZMAT2-002	521	53aa	ENSP00000473397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMX9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506644.3	ZMAT2-003	735	129aa	ENSP00000473644.1	Nonsense mediated decay		R4GNG8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,634 bps, Translation length: 199 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96NC0

CCDS

This transcript is a member of the Human CCDS set: CCDS4239

Version

ENST00000274712.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000468143 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.