Transcript: ENST00000476517.1 CDKAL1-002

Description

CDK5 regulatory subunit associated protein 1-like 1 [Source:HGNC Symbol;Acc:21050]

Gene Synonyms

FLJ20342

Location

About this transcript

This transcript has 3 exons, is associated with 12987 variant alleles and maps to 236 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274695.4	CDKAL1-201	3272	579aa	ENSP00000274695.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4546	Q5VV42	NM_017774.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378610.1	CDKAL1-001	3115	579aa	ENSP00000367873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4546	Q5VV42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378624.4	CDKAL1-202	3096	488aa	ENSP00000367889.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VV42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476517.1	CDKAL1-002	840	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 840 bps,

Version

ENST00000476517.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000039987 (version 1)