Transcript: ENST00000296701.6 FBXO38-201

Description

F-box protein 38 [Source:HGNC Symbol;Acc:28844]

Gene Synonyms

FLJ13962, Fbx38, HMN2D, MOKA, SP329

Location

Chromosome 5: 147,763,546-147,822,390 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 12 domains and features, is associated with 24582 variant alleles and maps to 659 oligo probes.

Gene

This transcript is a product of gene ENSG00000145868.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394370.3	FBXO38-001	4132	1113aa	ENSP00000377895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43384	Q6PIJ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340253.5	FBXO38-002	4424	1188aa	ENSP00000342023.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0PJ52 Q6AZE0 Q6PIJ6	NM_030793.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296701.6	FBXO38-201	3632	943aa	ENSP00000296701.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64285	Q6PIJ6	NM_001271723.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513826.1	FBXO38-003	3585	943aa	ENSP00000426410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64285	Q6PIJ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509699.2	FBXO38-020	1030	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505399.2	FBXO38-021	843	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503613.1	FBXO38-009	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521160.1	FBXO38-004	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511080.1	FBXO38-013	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504971.1	FBXO38-014	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508485.2	FBXO38-010	393	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504447.1	FBXO38-005	1716	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509273.2	FBXO38-008	1262	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509411.1	FBXO38-016	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508326.1	FBXO38-015	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514832.1	FBXO38-007	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502571.1	FBXO38-012	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508176.1	FBXO38-006	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508670.1	FBXO38-011	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502629.1	FBXO38-017	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,632 bps, Translation length: 943 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PIJ6

CCDS

This transcript is a member of the Human CCDS set: CCDS64285

Version

ENST00000296701.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000296701.6 FBXO38-201

Summary