Transcript: ENST00000393959.1 GABRB2-002

Description

gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:HGNC Symbol;Acc:4082]

Location

Chromosome 5: 160,715,436-160,973,649 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 31 domains and features, is associated with 109997 variant alleles and maps to 569 oligo probes.

Gene

This transcript is a product of gene ENSG00000145864.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274547.2	GABRB2-201	7385	512aa	ENSP00000274547.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4355	D1M715 P47870	NM_021911.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393959.1	GABRB2-002	7191	512aa	ENSP00000377531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4355	D1M715 P47870	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520240.1	GABRB2-004	2030	474aa	ENSP00000429320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4354	B7Z279 D1M715 E7EV50 P47870	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353437.6	GABRB2-001	1963	474aa	ENSP00000274546.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4354	B7Z279 D1M715 E7EV50 P47870	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517901.1	GABRB2-003	1779	411aa	ENSP00000430532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z279 D1M715 E7EV50	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517547.1	GABRB2-006	1349	314aa	ENSP00000429750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z279 D1M715	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523730.1	GABRB2-007	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522758.1	GABRB2-005	1029	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 7,191 bps, Translation length: 512 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P47870

CCDS

This transcript is a member of the Human CCDS set: CCDS4355

Version

ENST00000393959.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000252704 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000393959.1 GABRB2-002

Summary