Transcript: ENST00000274134.4 ROPN1L-001

Description

rhophilin associated tail protein 1-like [Source:HGNC Symbol;Acc:24060]

Gene Synonyms

ASP, FLJ25776, RSPH11

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 10834 variant alleles and maps to 326 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000503804.1	ROPN1L-002	1291	230aa	ENSP00000421405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3879	Q96C74	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274134.4	ROPN1L-001	1066	230aa	ENSP00000274134.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3879	Q96C74	NM_031916.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510520.1	ROPN1L-005	1105	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512022.1	ROPN1L-004	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515762.1	ROPN1L-003	794	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,066 bps, Translation length: 230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96C74

CCDS

This transcript is a member of the Human CCDS set: CCDS3879

Version

ENST00000274134.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206995 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.